Browse of TCMCG054C24848 protein

CDS

Accession Number	TCMCG054C24848
gbkey	CDS
Protein Id	XP_016651801.1
Location	complement(join(7894314..7894418,7894510..7894593,7894688..7894918,7895025..7895180,7895258..7895354,7895740..7895916,7896023..7896405,7896776..7896874,7897184..7897367,7897494..7897639,7897761..7897821,7898469..7899120,7899760..7899907,7899998..7900072,7900261..7900414,7900559..7900659,7900746..7900829,7901046..7901188,7901292..7901460,7901644..7901745,7901843..7901917,7902014..7902094,7902238..7902344,7903328..7903393,7903473..7903612,7903906..7904040,7904448..7904584,7905522..7905596,7905796..7905981,7907307..7907429,7907536..7907649,7908421..7908513,7909639..7909710,7909875..7909997,7910117..7910235,7912158..7912257,7913090..7913263,7913383..7913523,7913801..7914009,7914117..7914285))
Gene	LOC103339605
GeneID	103339605
Organism	Prunus mume

Protein

Length	1929aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA246160
db_source	XM_016796315.1
Definition	PREDICTED: rRNA biogenesis protein RRP5 isoform X2 [Prunus mume]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGCGTCTTCCCAGAAACCCCAAGGCAAGAAGAAGGCCAGAGACCCCCCAAAGTTCAACAAGTCCTCCAAACAGCCATTCAAACCAAACAAGGACCGAAACGACACTGCCCGGTCCGAAGCCGTGGCTTTGCAGCTGGAAGATGACGTCCCTGATTTCCCCAGAGGTGGAGGAAGTGCTTTGAACAGACAGGAGCGCGATGAAATTCGGGCTGAAGTCGATGCAGAATTTGAGGCAGAGGAGCGGGAGATGAAGAAAAGAAAGAAGATAGGGATGCAGAAGAAGAGTCTCTCATCGGAGGACGATTTGGGTTCGCTTTTCGGTGATGGTATTACTGGAAAACTACCTAAATATGCAAACAAGATCACTATGAAGAACATATCTGCTGGAATGAAGGTTTGGGGAGTTGTTGCTGAAGTAAATGAGAAGGACCTTGTAATTAGCCTTCCAGGGGGATTGCGTGGATTAGTTCGTGCTTCTGAAGCTTTGGATCCTATTTTGGATAATGAAACGAAGGCTGTAGCAGATAATCTCCTTGCTAGCGTATTCCATGTTGGACAGCTGGTATCTTGCATTGTGTTGCAGTTGGATGAGGACAAGAAAGAGAAAGGGAAAAGGAAGATCTGGCTTTCTTTGCGCCTATCTTTGTTGCATAAGGGCTTCACTTTGGATTCTGTCCAAGAAGGCATGGTCCTTACTGCATATGTTAAAAGCATTGAAGATCATGGTTACATTCTTCATTTTGGCTTATCTTCATTCACGGGGTTTTTGCCGAAAAATAGCCAAGCTGATAGCAAGGAGATTCAAGTAAACACTGGGCAACTACTTCAAGGCGCTGTTAGAAGTATTGACAAAGTCCGCAAGGTTGTGTATTTGAGTTCAGACCTTGAAACTGTATCAAAATGTGTGACCAAGGATCTCAAGGGAATTTCAATTGATCTACTTGTTCCGGGCATGCTGGTTAATGCTCGTGTGCTATCCACCCTTGAAAATGGGGTTATGTTATCATTTCTTACTTACTTTACTGGAACTGTTGACATATTTCATCTGCAAAATAGTTACCCTACCCTAAACTGGAAGGAGGATTATAATCAACACAAGAAGGTTAATGCTCGAATATTGTTTATTGACCCTTCAACTAGAGCTGTTGGTTTGACGCTGAATCCACATCTTGTCCGCAACAAGGCTCCTCCTTCACCTGTCAAAATTGGAGACATATGCGATGGCTCAAAAGTAGTCAGGGTAGATAGAGGGTTGGGTCTTCTGCTTGAAATACCATCTACCCCGGTTTCAACTCCGGCATACGTTAGTATATGTGATGTGGCTGAAGAGGAAGTTCGGAAGCTTGAAAAGAAGTTCAAGCAAGGTAGTCATGTTCGTGTCAGAGTTCTTGGTTTTAGGCACTTGGAAGGACTTGCGACAGGGATTTTGAAGGCCAGTGCTTTTGAAGGGACAGTGTTCACTCACTCAGATGTCAAGCCTGGGATGGTGGTGAAAGGTAAAATCATAGCTGTTGACAGCTTTGGTGCTATAGTGCAATTTCCTGGTGGTGTGAAGGCACTTTGCCCTCTTAATCATATGTCTGAATTTGAAATTGCAAAGCCTAGAAAAAAATTTAAGATTGGAGCTGAACTTCTGTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACCGTTACACACAAGAAAACACTTGTGAAATCTAATCTTGGGATTGTAAGTTCATATGCTGACGCAGCTGATGGATTAATAACCCATGGCTGGATAAGAAAGATTGAGGAACATGGATGCTTTATCCATTTTTACAATGGGGTCCAAGGATTTGCACCAAGATCTGAACTCGGATTAGAACCAGGATCGGATCCAAGTTCCATGTATCATGTTGGGCAAGTTGTCAAATGTAGAGTTATTAATTCGAATCCTACATCAAGGCGGATCAAGCTTAGCTTCATAATAAGGCCCCCAAGGGTTTCTGAGGATGATATGGCCAAGTTGGGTTGCCTTGTTTCAGGAGTTGTTGATCGAGTAACCCCCAATGCTGTTTATGTTAATGGAAAAGGTTACTCGATGGGTACAATTTTTACTGAGCACTTGGCCGATCACCACGGGCTTGCTGCTTTGATGAAGTCAGTTTTGAAGCCTGGATATGAATTTGATCAGTTGCTGGTATTAGACATTGAAGGGAACAATCTGATCCTCTCTGCAAAATATTCTCTGATTAATTCAGCTCAGCAGCTTCCCTCAGAACTTAGTCAAATTCATCCTAACTCAGTAGTACATGGCTACATTTGTAACTTAATTGAAACTGGGTGCTTTGTGCGCTTTCTTGGGCGTTTGACTGGTTTCTCCCCCAGGCACAAGGCAATGGATGACCATAAAGCTGATCTTTCAGAAGCCTATTACATTGGACAATCTGTTCGCAGTAATATACTCGATGTTAGTAGTGAAACAAGTCGAATAACTCTGTCATTGAAGCAGTCGTCTTGCACTTCAACAGATGCGTCCTTTATTCAGGAATACTTTATTTTGGAGGAAAAGATTGCTAAGCTGCAATTGTTGGACTCAAAAGAACCCAAGTCAAATTGGTCAGAAGGATTTACAATTGGCAGTGTTGTTGAGGGAAAAGTACAGGAGGTAAAGGACATTGGAGTTGTTGTCGGCTTTGAGAAATATAATGATGTCTTTGGTTTCATCACACACTATCAATGTGGTACCAATGTAGAAACAGGCTCCATCATTCAAGCAGTTGTCCTTGATATTGCCAATGCAGAGCACCTTGTTGATTTATCACTGAAACAAGAGTTCAATAATAAATTAAAAGAAAGTTCTAACAGCCAAAGTCATAAGAAGAAACGAAAAAGAGAAGCTTTGGATGGCCTGGAGGAACATCAGACAGTAAATGCAATTGTTGAGATTGTGAAGGAGAATTACCTGGTTCTTTCAATCCCGAAGTATAACTATACTATAGGATATGCATCAATCTCTGACTACAACACTCAAAAATTTCCTCAGAGACAGTTTTTGAATGGACAAAGTGTCAATGCCACGGTCATGGCCCTTCCAAGCCCTACAACAGCAGGAAGGTTGCTTATGCTACTTAACTCTCTAAGTGAGTCCGCTGAGACATCCAGTTCAAAAAGGGAAAAAAAGAAGTGCAGTTATAAAGTGGGATCTGTGGTTCAGGCCGAGATTACTGAAATAAAGCCTCTTGAACTAAGATTGAAATTTGGAATCGGCTTTCATGGGCGAGTTCATATAACAGAGGTAAATGATGAGCTTCTGGAAGAACCATTTAATAACTTCAGAATTGGGCAAACAGTGACTGCAAGGATTGTTGCTAAGACTAATTATTCAAATAGCAACAAAAAGAGCTATCAGTGGGATCTTTCCTTGAAACCTACCATGCTAACAGGATCCTGCGAAATAGGGGAGAAGATTATGACTGAAGATCTAGATTTCTCAACAGGGCAATGTGTCACTGGTTATGTTTATAAAGTGGATGGTGAATGGGTCTGGTTGACCATATCTCGAAATGTTAGGGCTCAGCTTTTTATTCTTGATAGTGCTTGTGAGCCTAGTGAACTTCAAGAGTTTCAGAAACGCTTTCATCTGGGAAATGCTGTATCTGGTTATGTATTAAGTGTTAACAGGGAGAAAAAGCTATTGCGACTAGTTGTGCATCCTTTATTTCCCGTCTCTGGCAAAACTGTTGATCATGAAGCTTCAAAGATCGAAGATCCGCACAATAACATCTTGAATGAGAATGTAACTGCTCATATTCGCGAGGGCAGTGTTGTAGGTGGGAGAATAATAAAAAAACTTCCAGGTGTTGGTGGGTTGACCGTGCAAATTGGACCCCATATGTACGGCAGGGTTCATTATAGTGAACTTTCTGACTCATGGGTGACTAACCCATTGTCTGGATATCATGAAGGGCAATTTGTCAAATGCAAGGTCCTTGAACTTATCCGCTCTGTAAGGGGTACTTATCACATAGATTTGTCATTACGCTCTTCTTTACTTGGCATGCTTGGTCCAGATTCCAAGGGATCCCATGATGACACGCATACTCATACCAAACGCGTGGAAAAGATCGAAGATCTTAATCCTAATATGATGGTTCAGGGTTATGTGAAAAATATTACTCCAAAAGGATGTTTTATTTTTCTTTCCCGGAAGATTGATGCCAAAATTCTTGTCTCCAATTTATCTGATGGATATGTTCAAGATCTTGAAAAAGAATTCCCAGTTGGAAAACTTGTAATTGGCAGGGTGTCATCTGTGGAGCCGCTATCGAAGCGAGTTGAAGTGACATTGAAGTCATTGGGTGCAACCAGTGCGACACAATCTGGAAGTAATAATTTGGATAGCTTGCATGTTGGAGATATTATCTCTGGCAGGGTAAAACGAGTGGAGCGATATGGTTTATTCATCACGATTGACAACACAAATGTGGTTGGACTATGCCATGTGTCAGAGCTTTCAGAAGATAAAGTAGAGAATATTGAAACCAAGTACAGAACAGGAGAGAGGGTGACAGCAAAAGTATTGAAGGTGGACAAAGATAGGCACCGAATTTCTCTTGGGATGAAGGATGTATATATCATGGAAAATAATGACCTTCAAACGTCTTCAGAACAAGATCCCGATGAAGACATTATAGAAAGTGGCAGAACGGATGGTAGTTTGTCTGCAATGTTTCCTGGAAGCAGTTCGTTTTGTACCCAGAACATGGATGTTGAATATGAAAATGCAGAGCCCCAGTTTCTTGCACAAGCAGAATCAAGAGCTTCTGTTCCTCCTCTTGAAGTCACTCTTGATGAGATAGACCAATTCAACGGTGATAATATTGTTAGTCAAGATCAAGAACATCCTGATGTGGACACTGTAAATGAAAAGAAAAAGCGGCTTACAAAGAAAAAAGCTAAGGAAGAAAGGGAGCGTGAGATAAGGGCTGCTGAGGAAAGACTATTGGAGAAAGATATACCAAGAACTGATGAGGAGTATGAGAAACTAGTTAGAAGCTCTCCAAATAGCAGTTATGTTTGGATAAAGTATATGGAATTTGTTCTCTCTACAGCTAATGTTGAGAAGGCACGCTCTATTGCCGAAAGGGCTTTGCAAACAATAAACTTCCGAGAAGAGAATGAGAAGCTCAATATTTGGGTGGCCTATTTTAATTTGGAAAACAAATATGGAAGTCCTCCAGAGGAGGCTGTAATGAAAGTCTTCCAAAGAGCAGTGCAATACAATGATCCCAAAAAGGTTCATCTAGCACTCTTAGGAGTGTATGAAAGGACTGAGCAACACAGGTTGGCTGATGAGCTATTTGATAAAATGATCAAGAAGTTCAAGAAGTCTTGCAAGGTTTGGCTAAGGCGGGTCCAGATGCTCTTGACACAACAGCGGGATGGGATTCAGGATGTTGTCAGTCAGGCTGAAAAAGTCCTTCCCAAGCATAAACATATCAAATTCAATTCACAGACAGCCATCCTTGAGTTTAAATGTGGAAATCCAGAGAGAGGGCGATCCATGTTTGAAAATATTTTGAGGAATAATCCGAAGAGAACAGACTTGTGGAGCGTCTATCTTGATCAAGAAATTCGACTTGGAGATAGTGATCTGATACATGCACTATTTGAGCGGGCAACTAGTTTGAGCCTCCCAGCAAAAAAGATGAAATTCTTATTCAATAAGTATCTGCAGTATGAGAAGTCTCATGGTGATGAAGAGAAGATCGAATATGTGAAACAGAAGGCAATGGATTATGTGAATTCTGTGGCTTGA

Protein:   MAASSQKPQGKKKARDPPKFNKSSKQPFKPNKDRNDTARSEAVALQLEDDVPDFPRGGGSALNRQERDEIRAEVDAEFEAEEREMKKRKKIGMQKKSLSSEDDLGSLFGDGITGKLPKYANKITMKNISAGMKVWGVVAEVNEKDLVISLPGGLRGLVRASEALDPILDNETKAVADNLLASVFHVGQLVSCIVLQLDEDKKEKGKRKIWLSLRLSLLHKGFTLDSVQEGMVLTAYVKSIEDHGYILHFGLSSFTGFLPKNSQADSKEIQVNTGQLLQGAVRSIDKVRKVVYLSSDLETVSKCVTKDLKGISIDLLVPGMLVNARVLSTLENGVMLSFLTYFTGTVDIFHLQNSYPTLNWKEDYNQHKKVNARILFIDPSTRAVGLTLNPHLVRNKAPPSPVKIGDICDGSKVVRVDRGLGLLLEIPSTPVSTPAYVSICDVAEEEVRKLEKKFKQGSHVRVRVLGFRHLEGLATGILKASAFEGTVFTHSDVKPGMVVKGKIIAVDSFGAIVQFPGGVKALCPLNHMSEFEIAKPRKKFKIGAELLFRVLGCKSKRITVTHKKTLVKSNLGIVSSYADAADGLITHGWIRKIEEHGCFIHFYNGVQGFAPRSELGLEPGSDPSSMYHVGQVVKCRVINSNPTSRRIKLSFIIRPPRVSEDDMAKLGCLVSGVVDRVTPNAVYVNGKGYSMGTIFTEHLADHHGLAALMKSVLKPGYEFDQLLVLDIEGNNLILSAKYSLINSAQQLPSELSQIHPNSVVHGYICNLIETGCFVRFLGRLTGFSPRHKAMDDHKADLSEAYYIGQSVRSNILDVSSETSRITLSLKQSSCTSTDASFIQEYFILEEKIAKLQLLDSKEPKSNWSEGFTIGSVVEGKVQEVKDIGVVVGFEKYNDVFGFITHYQCGTNVETGSIIQAVVLDIANAEHLVDLSLKQEFNNKLKESSNSQSHKKKRKREALDGLEEHQTVNAIVEIVKENYLVLSIPKYNYTIGYASISDYNTQKFPQRQFLNGQSVNATVMALPSPTTAGRLLMLLNSLSESAETSSSKREKKKCSYKVGSVVQAEITEIKPLELRLKFGIGFHGRVHITEVNDELLEEPFNNFRIGQTVTARIVAKTNYSNSNKKSYQWDLSLKPTMLTGSCEIGEKIMTEDLDFSTGQCVTGYVYKVDGEWVWLTISRNVRAQLFILDSACEPSELQEFQKRFHLGNAVSGYVLSVNREKKLLRLVVHPLFPVSGKTVDHEASKIEDPHNNILNENVTAHIREGSVVGGRIIKKLPGVGGLTVQIGPHMYGRVHYSELSDSWVTNPLSGYHEGQFVKCKVLELIRSVRGTYHIDLSLRSSLLGMLGPDSKGSHDDTHTHTKRVEKIEDLNPNMMVQGYVKNITPKGCFIFLSRKIDAKILVSNLSDGYVQDLEKEFPVGKLVIGRVSSVEPLSKRVEVTLKSLGATSATQSGSNNLDSLHVGDIISGRVKRVERYGLFITIDNTNVVGLCHVSELSEDKVENIETKYRTGERVTAKVLKVDKDRHRISLGMKDVYIMENNDLQTSSEQDPDEDIIESGRTDGSLSAMFPGSSSFCTQNMDVEYENAEPQFLAQAESRASVPPLEVTLDEIDQFNGDNIVSQDQEHPDVDTVNEKKKRLTKKKAKEEREREIRAAEERLLEKDIPRTDEEYEKLVRSSPNSSYVWIKYMEFVLSTANVEKARSIAERALQTINFREENEKLNIWVAYFNLENKYGSPPEEAVMKVFQRAVQYNDPKKVHLALLGVYERTEQHRLADELFDKMIKKFKKSCKVWLRRVQMLLTQQRDGIQDVVSQAEKVLPKHKHIKFNSQTAILEFKCGNPERGRSMFENILRNNPKRTDLWSVYLDQEIRLGDSDLIHALFERATSLSLPAKKMKFLFNKYLQYEKSHGDEEKIEYVKQKAMDYVNSVA